Bertram is Red John because:
-He is on the list of 7 suspects
-He drinks tea
-He is the director of CBI so he has power
-When he first met Jane he called him boy wonder which is what Jane's father used to call him and if
Bertram knows that it explains how Red John knew about Jane's past on the season 5 finale.
-On the Season 3 finale Bertram mentioned the word rope which gave the clue to Jane that O'Laughlin was the CBI mole and that led to Jane being framed which is what Red John wanted because he told Jane the Tyger Tyger poem.
-Jane said Red John would be at the mall at the end of the season finale and because Timothy Carter wasn't Red John then Red John was actually there which leaves Bertram.
-Bertram is familiar with the William Blake poem
-Its likely that Bob Kirkland works for Red John and on season 5 we see that Bertram has some kind of friendship with him when they was trying to figure out what Lisbon and Jane was up to
-Bertram helped in trying to frame Hightower in 3x16 when he informed La Roche about Hightower's relationship with one of Todd Johnson's victims
-He is the right age going off when Red John killed his first victim in the 80s which is shown in 5x13
-The episode where Bertram shook Jane's hand was was wrote by Bruno Heller.
-As the CBI director he can watch Jane's every move and take him off any case he wants so he has power over Jane
Yes Bertram is over 6ft and he is half bald but Rosalind Harker met Red John before season 1 and because she is blind it makes her unreliable. Bruno Heller has also said that some clues left to Red John's identity are fake so what if the height is a fake clue that would mean there isn't much points to make about him not being Red John.